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Special report
Crystallography in India
![[Map of India]](https://www.iucr.org/__data/assets/image/0003/5547/indiamap.gif)
Summary of activities between 1930 and 1980
The earliest crystallographic activity in India was the determination of the crystal structures of naphthalene and anthracene by K. Banerjee at IACS (Nature, 125, 456, 1930). IACS was the nucleus of crystallographic activity through the work of C.V. Raman, M.N. Saha, K.S. Krishnan, and S. Bhagavantam. These pioneers were physicists, and for decades, crystallography in India reflected a physics bias in the schools developed by G.N. Ramachandran in the U. of Madras, by A.R. Verma in Banaras Hindu U., (BHU), National Physical Lab. (NPL) and Delhi U., by S. Ramaseshan in National Aeronautical Lab., Bangalore and by R. Chidambaram in Bhabha Atomic Research Centre, Bombay, (BARC).
![[Ramachandran and collagen model]](https://www.iucr.org/__data/assets/image/0004/5548/ramachandranhelix.gif)
![[SiC and letter from Pauling]](https://www.iucr.org/__data/assets/image/0005/5549/sicarbide.gif)
G.B. Mitra (Indian Inst. of Technology, IIT, Kharagpur) studied thermal expansion of crystals and the relationships between lattice defects and particle sizes. He established methods for classifying coal, estimating mineral contents and particle sizes of coal minerals using X-ray diffraction. He also developed a microwave analogue for the calculation of structure factors. R. Chidambaram began a program of neutron diffraction in BARC, Mumbai and carried out original studies on amino acids and hydrogen bonding. Nucleic acid crystallography was introduced by M.A. Viswamitra in IISc. The first oligonucleotide dp(AT)2 structure solved by him, in collaboration with O. Kennard in Cambridge, gave the first view of a DNA duplex in atomic detail. Small molecule structure determinations were always being carried out in several groups, but the lack of proper instrumentation and computation was a definite handicap. Still, the early contributions of L. M. Pant (National Chemical Lab., NCL, Poona) on charge densities, H. Manohar (IISc) on topotactic reactions and natural products (Z. Krist., 1962, 117, 273), M.A. Viswamitra on nucleotides, and K. Venkatesan (IISc) on photochemical reactions in organic solids (Chem. Rev., 1987, 87, 433) are noteworthy.
Scientific communication with the international community was limited in those early years to leading personalities. Meetings conducted in Madras by G.N. Ramachandran in the 1960s attracted luminaries like W.L. Bragg, L. Pauling, D.C. Hodgkin, J.D. Bernal, J. M. Bijvoet, N.V. Belov, W. Cochran and A.I. Kitaigorodskii, while K. Lonsdale, F.C. Frank, P.L. Kapitza and F. Bertaut visited the laboratories of A.R. Verma in Delhi. Visits of Indians to foreign countries were even more limited. A.R. Verma and T.R. Anantharaman were trained abroad, but most others were homespun products, at the most spending a few years of post-doctoral studies abroad, mostly in the U.K.
Macromolecular crystallography and drug design
Early attempts towards establishing macromolecular crystallographic studies in India were initiated at IISc (M. Vijayan) and BARC (K.K. Kannan), in the late 1970s and early 1980s. Crystallography of peanut lectin (J. Mol. Biol., 1982, 154, 177; Proc. Natl. Acad. Sci. USA, 1994, 91, 227) at IISc marked the beginning of a very productive and scientifically rich protein crystallography program. The early focus of the BARC group was mainly on the crystallography of carbonic anhydrases (J. Mol. Biol., 1986, 190, 129; J. Mol. Biol., 1994, 241, 226). These two groups were working in geographical isolation, and special efforts were required for building necessary infrastructure and indigenous skills. Major infrastructural support provided by the Dept. of Science and Technology (DST) in 1983 to the Bangalore centre proved crucial in spurring subsequent growth and expansion of macromolecular crystallography in India. Macromolecular crystallography has now spread across the country, and more than 30 research groups in 15 institutions are now actively engaged in these efforts. Notable is the active participation of many groups in the international structural genomics initiatives (Curr. Sci., 2003, 85, 878). A large number of important protein structures from diverse organisms have been determined as a part of these efforts. Protein crystallography activities are marked by close collaborations between crystallographers, biochemists and molecular biologists.
![[Physallis mottle virus]](https://www.iucr.org/__data/assets/image/0015/5550/physallisvirus.gif)
![[Antibody antigens]](https://www.iucr.org/__data/assets/image/0016/5551/antigens.gif)
In Hyderabad, S.C. Mande (Center of DNA Fingerprinting and Diagnostics, CDFD) has actively pursued structural genomics of M TB and has determined the crystal structures of chaperonins, and chorismate mutase (J. Bacteriol., 2004, 186, 8105; Biochemistry, 2006, 45, 6997). The latter structure has provided valuable insights regarding the role of this enzyme in host-pathogen interactions. Also in Hyderabad, R. Sankaranarayanan (Center for Cellular and Molecular Biology, CCMB) has contributed to the structural genomics of M TB and has determined the mycobacterial type III polyketide synthase structure, providing a structural basis for generating diverse metabolites (Nat. Struct. Mol. Biol., 2004, 11, 894). After determining the structure of threonyl-tRNA synthetase from archaea, his group deciphered an interesting D-amino acid editing module coupled to the translational apparatus (Nat. Struct. Mol. Biol., 2005, 12, 556).
The group at the International Center for Genetic Engineering and Biotechnology, ICGEB, in New Delhi (A. Sharma) is pursuing the structural basis of host cell receptor recognition by malarial parasite (Nature, 2006, 439, 741). The structure of a gametocyte protein essential for sexual development in P falciparum has also been determined (Nat. Struct. Biol., 2003, 10, 197). S. Gourinath at the Jawaharlal Nehru U. (New Delhi) has determined the structure of a calcium binding protein from E histolytica (Proteins, 2007, 68, 990).
J. K. Dattagupta in Saha Inst. of Nuclear Physics (Kolkata) carried out structural work on proteases and protease inhibitors (Proteins, 2003, 51, 489; Acta Cryst., 1996, D52, 521). This group has evolved into a centre for structural genomics. Recently, the structure of a DNA binding protein lambda CII was determined at Bose Inst., Kolkata (P. Parrack) providing insights into the recognition of direct-repeat DNA by an unusual tetrameric organization (Proc. Natl. Acad. Sci. USA, 2005, 102, 11242). A.K. Das (IIT, Kharagpur) has initiated structural genomics studies and determined the crystal structure of a low-molecular-weight protein tyrosine phosphatase from M TB (J. Bacteriol., 2005, 187, 217581).
M.V. Hosur (BARC) is exploring structural biology of protease-inhibitor complexes towards rational design of HIV/AIDS drugs (Proc. Natl. Acad. Sci. USA, 2006, 103, 18464) while V. Kumar has addressed structural enzymology of acid phosphatases (Biochemistry, 2007, 46, 2079). C.G. Suresh (NCL) has determined the structures of penicillin V acylase and a conjugated bile salt hydrolase and has elucidated the evolutionary relationship between them (Nat. Struct. Biol., 1999, 6, 414; J. Biol. Chem., 2006, 281, 32516).
An active autolysate form of porcine alpha-trypsin was the first high resolution protein structure (1.8 Å) determined in Chennai by V. Pattabhi (Acta Cryst., 1997, D53, 311). The Madras U. centre has also provided valuable insights with regard to sequence dependent features of DNA structure (N. Gautham) based on a series of designed oligonucleotide crystal structures (Nucleic Acids Res., 2004, 32, 5945). D. Velmurugan has contributed to the modern approaches of macromolecular structure determination (J. Synchrotron Rad., 2004, 11, 358).
![[Tyrosine complex]](https://www.iucr.org/__data/assets/image/0019/5554/tyrosine.gif)
![[Mammary gland proteins]](https://www.iucr.org/__data/assets/image/0018/5553/milkproteins.gif)
Central Drug Research Inst., Lucknow established a strong group dedicated to drug discovery utilizing rational structure based methods led by H. Subramanya and subsequently by R. Ramachandran. Novel inhibitors have been designed to target a DNA ligase and Lysine e-aminotransferase from M. TB (J. Biol. Chem., 2005, 280, 30273; J. Mol. Biol., 2006, 362, 877; Med. Chem. Res. 2007, 15, 181) using the structural information as well as virtual screening techniques. This group successfully deciphered the function of a protein based on its crystal structure and showed that it is a SAM-dependent methyl transferase (J. Mol. Biol., 2001, 312, 381).
Other groups, in Madurai Kamaraj U. (S. Krishnaswamy), IITs in Roorkee (P. Kumar & A.K. Sharma), Chennai (N. Manoj) and Kanpur (B. Prakash) and Inst. of Microbial Technology, Chandigarh (S. Karthikeyan) are also actively pursuing structural biology programmes by multi-dimensional approaches that dominantly include crystallography. Other institutions such as National Centre for Biological Sciences (NCBS), Bangalore, Inst. of Genomics and Integrative Biology, Delhi, Panjab U. (Chandigarh) and Tata Memorial Centre (ACTREC), Navi Mumbai have recently initiated crystallography-based modern biology research activities. The protein folding problem has also been addressed through the design of structural motifs in oligopeptides (N. Shamala, S. Ramakumar, IISc; V. Pattabhi, Chennai). While macromolecular crystallography seems to have acquired the critical mass required for continued progress, keeping pace with future international developments in this field could be considerably limited due to lack of easy access to synchrotron radiation sources.
Professor M. Vijayan
![[M. Vijayan]](https://www.iucr.org/__data/assets/image/0020/5591/vijayan.gif)
Crystal engineering and structural chemistry
Till around 2000, chemical crystallographers in the country were struggling to get even the unit cell of a crystal and an ORTEP diagram because the scientific funding bodies of the government did not favour the general acquisition of state-of-the-art single crystal X-ray diffractometers. A change in this attitude resulted in a vastly improved situation for chemical crystallographers, indeed one wherein the Indian contribution to this global activity is represented by the deposit of over 2000 crystal structures in the Cambridge Structural Database (CSD) during the past seven years. Of these, about a third originate from the U. of Hyderabad where early work by G.R. Desiraju laid the foundations of the subject of crystal engineering worldwide (See box). The additional routine availability of low temperature equipment, powder diffractometers, automated structure solution software and inexpensive high performance computers is a further advantageous factor. Luckily, the hectic pace of research in small molecule crystallography in India also comes at a time when the subject of crystal engineering is growing rapidly, and the Indian contribution in the high impact journals Crystal Growth & Design (IF 4.37) and CrystEngComm (IF 3.71) is truly impressive. Several aspects of crystal engineering such as intermolecular interactions, crystal synthesis, crystal growth, polymorphism, and at a fundamental level, understanding the mechanism of crystallization, is being actively pursued by around 10 to 15 independent groups. One may confidently state that these groups are at the forefront of this innovative and outward-looking branch of the chemical sciences, which goes beyond traditional divisions of organic, inorganic and physical chemistry.
![[Bending of a pyrazinamide crystal]](https://www.iucr.org/__data/assets/image/0020/5555/pyrazinamide.gif)
The ongoing activities within the Indian crystal engineering community and in related areas are now summarized for the IITs, the single largest category of institutions in this section, followed by the universities, and finally the Government laboratories of CSIR. The reader should note that there is also a great deal of crystal structure analysis of small molecule structures in other chemical and biological projects wherein crystal structure systematics was not the main aim, and in service crystallography groups, and that the number of 2000 structures in the CSD quoted above pertains largely to the activity in the crystal engineering field.
A. Ramanan at IIT, Delhi is developing chimie douce (soft chemistry) techniques such as hydrothermal, sol-gel and molten flux methods to isolate new hybrid materials with multi-dimensional structural features including nanomaterials. His objective is to establish reliable connections between molecular and supramolecular structures on the basis of intermolecular interactions, especially hydrogen bonding. A systematic investigation of crystal growth and influence of the solvent medium and reaction conditions (pH, temperature and hydrothermal/solvothermal) have enabled his group to recognize the building of molecular and hybrid solids in terms of supramolecular assembly of molecular species. The templating role of organic ligands and counter ions in helical structures, interpenetrating networks and pillared frameworks are demonstrated in vanadates, molybdates, MOFs, calcium phosphates and crystal hydrates. A theme paper elucidating the chemical events from molecular recognition and supramolecular assembly to metal-organic frameworks appeared as a Perspective in Crystal Growth & Design (2006, 6, 2419). The synthesis of mononuclear, binuclear, trinuclear and polynuclear metal carboxylate complexes interests J.B. Baruah at IIT, Guwahati. Origins of polymorphism in aqua-bridged 2-nitrobenzoato cobalt(II) complexes have been ascribed to differences in the orientation of aromatic-ring substituent. Co-crystals of neutral transition metal complexes and crystal structures of phthalimide and 1,8-naphthalimide derivatives are systems of interest, the latter for their optical properties. M. Ray is assembling chiral molecules into cages and organized networks using metal complexes of amino acid derivatives. The metal provides the stability while the organic ligand directs the hydrogen bonding. His group synthesized and characterized a supramolecular capsule of L-histidine-Cu(II) and discovered an elegant way to reversibly disassemble the capsule via a molecular trigger. Helical channels of histidine ligand with Fe(III) can be emptied and refilled with iodine (Angew. Chem. Int. Ed., 2003, 42, 1940).
![[Mesitoic acid]](https://www.iucr.org/__data/assets/image/0004/5557/mesitoic.gif)
![[Sulfanilate network]](https://www.iucr.org/__data/assets/image/0005/5558/sulfanilate.gif)
P. Mathur’s research in IIT Mumbai is on the synthesis of organometallic and mixed-metal clusters and of metal ion complexes of carbohydrates and calixarenes. He works on the designed construction of metal cluster compounds by using lone pairs of single atom ligands for addition to coordinatively unsaturated metal carbonyl fragments. He studies nonlinear optical activity of novel mixed-metal and mixed-chalcogen clusters. This methodology is extended to the incorporation of organic fragments in chalcogen-bridged metal carbonyl clusters for reactivity modulation. Biomimetic chemistry of essential metal ions provides means to design systems for ion and molecular recognition in C.P. Rao’s group, in this institute. Understanding the binding of small molecules to proteins, e.g. lectins, and their inhibitory role towards glycosidases is one of their goals.
![[Nanotube host-guest]](https://www.iucr.org/__data/assets/image/0006/5559/nanotube.gif)
In IISc, T. N. Guru Row has established a program for mapping of electron densities in crystals to obtain insights into the nature of chemical bonding. This development has been possible only because of the increasing number and availability of CCD detectors and low temperature facilities. The significance of charge density results have been analysed to obtain insights into the nature of intermolecular contacts such as C-H···O, C-H···π, π···π, C-H···S and S···S (Cryst. Rev., 2005, 11, 199; Acta Cryst. B., 2006, 62, 118). The appearance of a “region of overlap” to segregate hydrogen bonds from van der Waals interactions has been identified.
In the CSIR labs, P. Dastidar, formerly at the Central Salt and Marine Chemicals Research Inst., Bhavnagar (now at IACS) has been working on the crystal engineering of organic and inorganic materials. The goal is to understand the structural basis of gelation by studying supramolecular synthons in crystals. Organic gelators have potential application in containing oil spills. They demonstrate supramolecular and structural diversities in metal-organic frameworks (MOFs) as a function of the ligating topology and the hydrogen bonding backbone and its use in anion control and recognition. In a remarkable discovery last year, near-spherical crystals of common salt, NaCl, were grown by an ingenious method of recycling glycine, a crystal habit modifier. Their research paper in Cryst. Growth Des. 2007, 7, 205 was listed in the section “Year in Ideas - 2006” by The New York Times.
In NCL, Pune, M.M. Bhadbhade is studying hydrogen bonding, crystal packing and polymorphism in inositols. Diastereomers of 2,4(6)-di-O-benzoyl-6(4)-O-[(1S)-10-camphorsulfonyl]-myo-inositol 1,3,5-orthoformate associate via C-H···O interactions and do not leave voids for guest inclusion whereas association via S=O···C=O bridges produced pseudopolymorphs. A guest-free form I (P21) and solvated forms II and III (P21 and C2) were crystallized and characterized by X-ray diffraction. Selective inclusion in channels is of potential application in separation science (Cryst. Growth Des., 2005, 5, 833; see also Aitipamula and Nangia, Chem. Eur. J., 2005, 11, 6727). S=O···C=O dipolar short contacts, a persistent interaction in these structures, is relevant to the binding of sulfonyl drugs to the C=O moiety of receptor proteins. Continuing in the same series, myo-inositol hexabenzoate of meso configuration gave a resolved polymorph (Form I, P61) when crystallized rapidly but yielded a centrosymmetric polymorph (Form II, P-1) by slow crystallization (Chem. Commun., 2004, 2530). Additionally, Bhadbhade has begun analysis of halogen bonding by charge density. Using a patented technology developed by V. Puranik, Asomex-2.5, the first chirally pure anti-hypertensive drug was launched in the Indian market by Emcure Pharmaceuticals.
Apart from the groups mentioned above, M.S. Hundal at Guru Nanak Dev U., Amritsar is studying hydrogen bonding between metal-organic frameworks and anions in helical chains, staircase coordination polymers, and self-assembled supramolecular structures. Additionally, structural chemistry is being pursued at U. and Panjab U., Chandigarh. It is believed that the quantity and quality of work in crystal engineering from India will increase greatly in the coming years.
Professor G.R. Desiraju
![[Desiraju's major works]](https://www.iucr.org/__data/assets/image/0003/5556/angewandte.gif)
Bioinformatics, database development and drug discovery
A natural inclination of the Indian mind is to try to find common threads linking diverse facets of life, and from the earliest days of the Ramachandran plot this inclination has led to India being a fertile ground for attempts to decipher patterns hidden in the vast amounts of data generated by crystallography. The concept of weak hydrogen bonding, exemplified by interactions such as C-H∙∙∙O and X-H∙∙∙π, was greatly extended by G.R. Desiraju (U. of Hyderabad; Chem. Comm., 1989, 179) using the CSD, and is now being applied to understand the stability of protein folds and their interactions with ligands (V. Pattabhi, Chennai, Acta Cryst., 1997, D53, 316; P. Chakrabarti, Bose Inst., Kolkata, J. Mol. Biol., 1998, 284, 867; S. Ramakumar, IISc, Acta Cryst., 1990, A46, 455). Likewise, the concept of aromatic···aromatic interactions has been invoked to understand the relative orientations between planar side chains in proteins. With the increasing availability of high resolution structures in the Protein Data Bank there are many groups pursuing structural bioinformatics to understand the structure and function of macromolecules at the molecular level. The topics include analysis of side chain rotamers (V. Sasisekharan, M. Vijayan, IISc), local structures in proteins (C. Ramakrishnan, IISc), side chain influence on main chain conformation (P. Chakrabarti, Prog. Biophys. Mol. Biol., 2001, 76, 1), clustering of residues and its implication in protein thermostability (S. Vishveshwara, IISc). The stereochemical modeling of disulfide bridges (C. Ramakrishnan, P. Balaram, Protein Eng., 1993, 6, 873) is now an important component of strategies to enhance protein stability. In addition, other databases like PALI, SUPFAM (IISc), DDBase, SMoS (NCBS), porins and prophages (S. Krishnaswamy, MKU), lectins (IISc), conformational angles (IISc), and secondary structural motifs (Bose Inst., NII, CCMB) facilitate efficient analysis. New algorithms and machine learning approaches have been explored in a variety of situations: application of mutually orthogonal Latin square sampling in protein structure prediction (N. Gautham, Chennai) and graph theoretical approaches for understanding and classifying protein structure networks (IISc and IIT, Mumbai).
At the DNA level, the variations in oligonucleotide crystals (M. Bansal, IISc), and the location of water molecules and their implication for DNA function (B. Jayaram, IIT, Delhi) have been rationalized. A. S. Kolaskar in U. of Poona has designed selective inhibitors for P. Falciparum aspartic proteases through in silico approaches (Frontiers Biophys., 2005, 168). In Hyderabad, modelling tools such as virtual screening, pharmacophore generation, molecular dynamics and QSAR have been used to understand the binding of drugs to macromolecules by G.R. Desiraju, U. of Hyderabad, J.A.R.P. Sarma, GVKBio, and B. Gopalakrishnan, Tata Consultancy Services, TCS, (J. Chem. Inf. Model., 2005, 45, 725). A software package has been developed to analyze weak hydrogen bonds in biological structures (Proteins, 2007, 67, 128). A recent exercise sponsored by the CSIR involved TCS (M. Vidyasagar, S. Mande) with more than 20 academic partners, and resulted in an entire software platform (Bio-suite) which is now being successfully marketed by TCS (Curr. Sci., 2007, 29). Bio-suite provides tools for predicting biological activities, and for studying binding energy patterns among functionalities. There are now specialized webservers and databases dealing with protein domain superfamilies and spatially interacting motifs, (R. Sowdhamini, NCBS, N. Srinivasan, IISc).
![[GVKBio building]](https://www.iucr.org/__data/assets/image/0016/5560/gvkbio.gif)
Powder diffraction and industrial crystallography
Applications of X-ray diffraction in the Indian pharmaceutical industry began in the early 1990s. With the current extreme interest in solid forms of active pharmaceutical ingredients (API), especially with the application of crystal engineering methods to polymorphs, pseudopolymorphs, multi-component crystals (“co-crystals”), mixed phases and amorphous forms, it is no wonder that several academic and industrial groups are seriously engaged in development and application of the powder diffraction techniques (PXRD). Different polymorphs exhibit different physical and/or chemical properties such as solubility, bioactivity, bioavailability, physicochemical, formulation and processing parameters as well as the shelf life of the drug substance and formulated product. Therefore, understanding and controlling the solid-state properties of APIs, both as pure drug substances and in formulated products, is an important aspect of the drug development process. The enforcement of TRIPS (trade related aspects of intellectual property rights) agreements since 2005 has caused a paradigm shift in India’s bulk and formulation oriented pharmaceutical industry. Indian generic companies will now need to compete with the multinationals by focusing on drug development and produce their own patented products. It is realized that intellectual property issues can only be addressed by careful screening of drugs for the absence of forms patented by other companies. Another important aspect in this area is the determination of crystal structures from PXRD data because growing single crystals has been difficult for some APIs. For example, T. N. Guru Row (IISc) and A. Mukherjee (Jadavpur) are collaborating with Dr. Reddy’s Laboratories (K. Vyas; Hyderabad) to develop methodologies for ab initio structure solution packages from PXRD data. A. Nangia (in collaboration with G. Kruger in South Africa) has made interesting contributions pertaining to discovery of new drug polymorphs and co-crystals using variable temperature PXRD (Chem. Asian. J., 2007, 2, 505). Other Indian pharmaceutical companies such as Alembic (Vadodara), Orchid, Shasun (Chennai), Sun (Vadodara), Torrent (Ahmedabad), Ranbaxy (Delhi), Lupin (Pune), Cadila (Bangalore) and Aurobindo, Suven, Matrix, Hetero (Hyderabad) are actively involved in these efforts. A measure of the success of the Indian pharmaceutical industry in this area may be seen in the increasing number of Para IV filings that are being concluded successfully in the U.S. law courts.
Crystal growth and diffraction physics
A centre for crystal growth was established in NPL (K. Lal) in the 1970s and continues to make several contributions. Many whisker crystals were grown and investigated with a high resolution X-ray Laue technique. X-ray diffraction topography was used to confirm the absence of screw dislocations in ZnS whiskers. Also studied were Al2O3, garnet and semiconductors. Also developed was a new high-resolution technique and a three-crystal X-ray diffractometer to investigate diffuse X-ray scattering from nearly perfect single crystals very close to reciprocal lattice points. With this set up it was possible for the first time, to make diffuse X-ray scattering (DXS) measurements on Si single crystals very close to the diffraction peaks having a half width of only ~ 5 arc sec. This DXS technique is now a powerful non-destructive tool to characterize point defects and their clusters in nearly perfect crystals. High resolution methods were also used to study thin diamond crystals having varying degrees of perfection. It was shown that point defect clusters are obtained with sizes in the range 40-190 nm. Techniques of defect measurement are closely related to crystal growth methods, and naturally these methodologies have developed in parallel in the NPL group. Crystal growth facilities have also been established in Mysore (K. Byrappa) where there is a focus on hydrothermal methods and in BARC (J.S. Yakhmi) where large alkali halide crystals have been grown for applications in nuclear radiation detection.
T.R. Anantharaman (BHU), with his students P. Rama Rao and S. Lele, established an active school in the field of X-ray line profile analysis in the 1960s. This technique may be used to study the diffuse streaking which is observed in the X-ray diffraction of materials which have random distributions of stacking faults (J. Appl. Cryst., 1987, 20, 84). The presence of such faults leads to characteristic peak broadening and/or peak shifts of powder diffraction profiles (G.B. Mitra, IIT Kharagpur; S.P. Sen Gupta, IACS). Indian contributions to the theoretical aspects of this field (S. Lele, D. Pandey, BHU), especially the introduction of the concept of non-random faulting when stacking faults bring about phase transformation from one layer stacking to another, are noteworthy. Other contributions by D. Pandey are the use of X-ray diffraction in the field of doped quantum paraelectrics, morphotropic phase transitions and ferroelectric transitions.
Dr. K. Lal
![[Frank, Verma and Lal]](https://www.iucr.org/__data/assets/image/0017/5561/lal.gif)
Quasicrystals
The advent of quasicrystals as an ordered but aperiodic arrangement of atoms in the solid state saw several innovative research results originating from India. K. Chattopadhyay and S. Ranganathan (IISc) discovered a new type of quasicrystalline phase known as the decagonal phase (Acta Metall., 1987, 35, 727). Together with S. Lele (BHU) they analyzed vacancy ordered phases as an example of one dimensional quasicrystals. P Ramachandra Rao and G.V. S. Sastry (BHU) blazed a new path in the synthesis of quasicrystals by rapid solidification of Mg-Zn-Al alloy. C. Suryanarayana (BHU) discovered polytypism in quasicrystals. S. Lele and R.K. Mandal (BHU) were the first to postulate the existence of pentagonal quasicrystals. Using Pettifor maps, Ranganathan also provided new insight by demonstrating that all quasicrystals are either binary or pseudobinary. Other notable contributions came from J.A. Sekhar and T. Rajasekharan (Defence Metallurgical Research Lab., Hyderabad), and from S. Banerjee, G.K. Dey, U.D. Kulkarni and R. Chidambaram in BARC.
However, India missed some opportunities in this area. Early work of T.R. Anantharaman on Mn-Ga alloys and G. V.S. Sastry and C. Suryanarayana (BHU) on Al-Pd alloys came tantalizingly close to the discovery of quasicrystals.
Liquid crystals
S. Chandrasekhar (RRI, Bangalore) made a seminal discovery in 1977 on a new type of liquid crystal made of stacked disc-like molecules (Pramana, 1977, 9, 471). These columnar or discotic liquid crystals have since become an important branch of research, and 2D lattices with hexagonal, and different types of rectangular arrangements have been found. X-ray scattering studies have been useful in identifying these phases and also other smectic and nematic phases. Studies by N. Madhusudana and R. Pratibha in RRI (Curr. Sci., 1997, 73, 761) and by C. Manohar in BARC have delineated the transformations between these phases. A very unusual skew-cybotactic (smecticC-like) arrangement which exhibits fibre-like patterns of molecules tilted with respect to the local layer-normal have been discovered in some special compounds (U. Deniz, BARC). If the molecules are chiral, the liquid crystalline compound often exhibits a superstructure at the micrometer scale. Many mesogenic rod-like and disk-like compounds can also be crystallised from solution and V.A. Raghunathan (RRI) has found new types of molecular organisation based on such systematic X-ray studies.
Neutron scattering facilities
A national facility for neutron beam research, designed and developed indigenously is operated in BARC, Mumbai (R. Mukhopadhyay; S.L. Chaplot). The facility has been built around the research reactor Dhruva that uses natural uranium as fuel and heavy water as both moderator and coolant. At present, a four-circle single-crystal diffractometer, three powder diffractometers, a high-Q diffractometer, a polarization analysis spectrometer, a triple-axis spectrometer, a filter detector spectrometer, and a quasi-elastic scattering spectrometer are located inside the reactor hall on various beam ports. Two neutron guide tubes, G1 and G2 with characteristic wavelengths 3.0 Å and 2.2 Å respectively, transport neutron beams into the Guide-Tube Lab. from the reactor hall. The average flux at the breaks, provided on the guides to accommodate various instruments, is ~107 neutrons/cm2/s. Two small-angle neutron scattering instruments and a polarized neutron reflectometer are operational at G2 one after another. A spin-echo cum polarised neutron small-angle instrument has also been commissioned recently at G1.
Synchrotron facilities
Two synchrotron sources, Indus-1 (450MeV) and Indus-2 (2.5 GeV), were planned and designed by the Atomic Energy Commission Govt of India as national facilities at Raja Ramanna Centre for Advanced Technology at Indore. Of these, Indus-1 with a critical wavelength of 61 Å has been commissioned and is routinely operated at the design current of 100 mA. The beam lifetime achieved at 100 mA is 75 minutes. This vacuum ultraviolet/ soft X-ray source is used by various research groups in the country. Indus-2 with a critical wavelength of ~2 Å is in the process of being made operational. The Indian effort to acquire indigenous synchrotron capabilities has been long and arduous, even as it has been well-meaning. With rapid changes in the international scientific scenario, there is a real sense of urgency in having ready access to state-of-the-art synchrotron facilities by macromolecular, small molecule and industrial crystallographers. Reference has already been made to the fact that a whole generation of Indian crystallographers were enfeebled in the past because of the general absence of single crystal diffractometers between 1975 and 1995. It is sincerely hoped that the same scenario will not be repeated in another context.
National Committee for Crystallography
ICSU activities in India were brought under the banner of the Indian National Science Academy, INSA (then known as National Inst. of Science India) in 1968. The first and second National Committees appointed by INSA were chaired by G.N. Ramachandran. Subsequent chairs were A.R. Verma, S. Ramaseshan, N.N. Saha, R. Chidambaram, M.A. Viswamitra, S.P. Sen Gupta, K.K. Kannan, K. Lal, O.N. Srivastava and S.K. Sikka. In 2004, the National Committees of IUCr and IUPAB were merged on an experimental basis with M. Vijayan as chair. This committee will be demerged in 2008, and a new National Committee for Crystallography with P. Chakrabarti as chair (members K. Byrappa, S. K. Halder, A. Nangia, C. G. Suresh) will assume responsibility in January 2008. The National Committee has consistently played a major role in the collective activities of the crystallographic community in India and in its liaison with the IUCr.
Recognition by IUCr to the Indian crystallographic community has come in the form of the Ewald Prize to G.N. Ramachandran, the elections of S. Ramaseshan and R. Chidambaram as vice-presidents, and of G.R. Desiraju as a member of the current executive committee. P. Krishna, has been a former Chairman of the Commission on Crystallographic Teaching. M. Vijayan, a former Chairman of the Commission on Biological Macromolecules is president of the Asian Crystallographic Association (AsCA) till the end of 2007. G.R. Desiraju, M.R.N. Murthy, D. Pandey and M. Vijayan have served as past or present co-editors of Acta Cryst.
Indian Crystallographic Association
![[ICA council members]](https://www.iucr.org/__data/assets/image/0018/5562/icacouncil.gif)
Comings and goings
![[Editors of special issue]](https://www.iucr.org/__data/assets/image/0019/5563/editors.gif)